CDS

Accession Number TCMCG007C28446
gbkey CDS
Protein Id XP_018514192.1
Location complement(join(18756608..18756739,18756812..18756949,18757038..18757136,18757283..18757695,18757780..18758511,18758841..18758977,18759121..18759149))
Gene LOC103865579
GeneID 103865579
Organism Brassica rapa

Protein

Length 559aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018658676.2
Definition probable E3 ubiquitin-protein ligase ZFP1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc finger, C3HC4 type (RING finger)
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K14297        [VIEW IN KEGG]
ko:K19041        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051865        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTGACTCGTTTTCAGCAACCATTTGGGTTAGCTGGACTCCAAGGTTGAAGATTTGTGTAATCATGGGGCACAGACATTTTCCTGGCTCTTTCCAATTTTTCGATGATGAACAGGATCAAGGCTGGAACCATATACACCCAGAGCACCCATATACGAGTTTAGCAAGAACTGGGACCAGTGAGAGCAGATCGCATGTTAATCCAGCAGGAAACGTGTTGAATGAAGGAATGCCATTTTCTTCGCACTGGAACTCTTCTACAGGACCAAATGCGTATACTGCTTCAGGTCATGGTGTAGAGAGGCTACACTACAATCCAGGGACTAGCGGCCCCACCCATGTTCCTGTCATGAGTTCAGCAGCTGCAACTTTCTCTGCTCCACTTGAACATTATGTGACATCTGCATCTTCTTCGTACTGCAACAGTCAGACATGGTCATTGGATGGCTATGTTGATCTACATATGGAAAATGTGAGAGGAGCACAGAAGCGGAAAACCCCATGCGATTCTTCCGTCTATGAAATGGGTAGTTCAAGCCATTACCACGGTGGCAGAACTTCCTCAGATATCCCTTTCTCCTCGGAGTTGGACATGGGAAAATCAACAACTCGTGATCATGATCCTCATTACATGCCGTGGCTCATGAACCCAAGTTACAGAAGTAATAATCTCTCGATCAGGGGAGAGAGTTCTTCAAGGAATGTCCGGAGTCGTCCTACACTTGATTTAGAGACTAGTGTAGATAGAAATATTTTTTCAAGAAGCTTGGACCTTGATTCTCATCCTACACATCACAATGTTGAGCACTCTAGCTCAGATCAGTTTCCTGGTCAAACATCTCACAGGAATAAGGACTGGAACTGGAACTTTCCTAGACACTCCCCAGTACCTAGAGATTTAAATGGCTTTAGTCCAAAGACAAATAATTTTCTTCCCACGAGAAGTGTCGTCAACAGCACATCTGTTGATACCTCTTGGTATCACCAAGGGCTAATCGGAAACAGAAACTCTACAGTTTCCCACGGTTTTCCTGGAACTTCAACACAATCTGCAACTAGCTCCCGCTTCTCTCATAGGTCAACACCCACCTATAGATCTTCTTCAAACGCTTTGCGATTGGAACATTCAGCATATTCTTCTGGAGATAGGTCTCCTTTTGTCACTGAGACATATCCTTCTAGGCATCTGAGGCCACCACCACACATCTCATGGCGTAGCAGTGATCGCCCAGGGAGACGCAGGAGTTCCTATGAGAGGTTTCAGCCTCCTTTCGATGAAGTGGCTCTCCATGAACCATTTTCATCTCAGGGATTTATGGCTGTAGATCACCAACAGCACTATGGATCCAGGAATATGCATGATCACCACAGAGACTTGAGGCTCGACATCGATGACATGACCTACGAGGACCTTATTGATCTTGTTGAAAGGATTGGGAGTGTGAACACTGGTCTATCCAACGGCGCAATCTCCAGTTGCTTGTTGGAGACGATATTCTACCCATTGTATCAAACGGATGAGGAAAGAAAATGTGCAATCTGCCTGGCGGAATACAAGGAAGGAGAAGAGTTGGGGGAACTTAAAGGGTGTGGTCATGACTACCATGGAGGGTGCATAAAGAAATGGCTGTCTTTGAAGAACTCTTGCCCTATCTGCAAATCACCTGCTTTTACCTGA
Protein:  
MGDSFSATIWVSWTPRLKICVIMGHRHFPGSFQFFDDEQDQGWNHIHPEHPYTSLARTGTSESRSHVNPAGNVLNEGMPFSSHWNSSTGPNAYTASGHGVERLHYNPGTSGPTHVPVMSSAAATFSAPLEHYVTSASSSYCNSQTWSLDGYVDLHMENVRGAQKRKTPCDSSVYEMGSSSHYHGGRTSSDIPFSSELDMGKSTTRDHDPHYMPWLMNPSYRSNNLSIRGESSSRNVRSRPTLDLETSVDRNIFSRSLDLDSHPTHHNVEHSSSDQFPGQTSHRNKDWNWNFPRHSPVPRDLNGFSPKTNNFLPTRSVVNSTSVDTSWYHQGLIGNRNSTVSHGFPGTSTQSATSSRFSHRSTPTYRSSSNALRLEHSAYSSGDRSPFVTETYPSRHLRPPPHISWRSSDRPGRRRSSYERFQPPFDEVALHEPFSSQGFMAVDHQQHYGSRNMHDHHRDLRLDIDDMTYEDLIDLVERIGSVNTGLSNGAISSCLLETIFYPLYQTDEERKCAICLAEYKEGEELGELKGCGHDYHGGCIKKWLSLKNSCPICKSPAFT